Steven Gygi, Ph.D.

Steven Gygi, Ph.D.

Professor of Cell Biology (HMS)
C-523C

Steven Gygi, Ph.D., received his Ph.D. from the University of Utah in Pharmacology and Toxicology performing small molecule mass spectrometry.  He went on to pursue postdoctoral work with Ruedi Aebersold at the University of Washington in 1996.  A revolution in biological mass spectrometry was occurring which allowed for the measurement of protein expression levels and a new field, Proteomics, was born.  In 2000, Dr. Gygi moved to Harvard Medical School and joined the Department of Cell Biology.  Currently, he is the faculty director of two MS core facilities (Taplin Biological MS Facility, and the Thermo Fisher Center for Multiplexed Proteomics—TCMP@HMS).

Research in the Gygi lab centers around developing and applying new technologies in the field of mass spectrometry-based proteomics.  These include the systematic and proteome-wide measurements of many protein properties including their expression levels, modification states, structure, localization, function, and interactions.  For example, the Gygi lab, together with the Harper lab at HMS, is creating a genome-scale map of the protein-protein interaction landscape in cells (termed BioPlex).  In addition, sample multiplexing techniques like Tandem Mass Tags (TMT) are being improved to allow up to 16 proteomics samples to be analyzed simultaneously using high resolution mass spectrometry.

Harvard Medical School

Dept. of Cell Biology, C-523B

240 Longwood Avenue

Boston, MA 02115

Quantitative Proteomics of the Cancer Cell Line Encyclopedia.
Authors: Authors: Nusinow DP, Szpyt J, Ghandi M, Rose CM, McDonald ER, Kalocsay M, Jané-Valbuena J, Gelfand E, Schweppe DK, Jedrychowski M, Golji J, Porter DA, Rejtar T, Wang YK, Kryukov GV, Stegmeier F, Erickson BK, Garraway LA, Sellers WR, Gygi SP.
Cell
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High-density chemical cross-linking for modeling protein interactions.
Authors: Authors: Mintseris J, Gygi SP.
Proc Natl Acad Sci U S A
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Multiplexed proteome profiling of carbon source perturbations in two yeast species with SL-SP3-TMT.
Authors: Authors: Paulo JA, Navarrete-Perea J, Gygi SP.
J Proteomics
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Optimized Workflow for Multiplexed Phosphorylation Analysis of TMT-Labeled Peptides Using High-Field Asymmetric Waveform Ion Mobility Spectrometry.
Authors: Authors: Schweppe DK, Rusin SF, Gygi SP, Paulo JA.
J Proteome Res
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Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.
Authors: Authors: Iglesias N, Paulo JA, Tatarakis A, Wang X, Edwards AL, Bhanu NV, Garcia BA, Haas W, Gygi SP, Moazed D.
Mol Cell
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Mechanism of adrenergic CaV1.2 stimulation revealed by proximity proteomics.
Authors: Authors: Liu G, Papa A, Katchman AN, Zakharov SI, Roybal D, Hennessey JA, Kushner J, Yang L, Chen BX, Kushnir A, Dangas K, Gygi SP, Pitt GS, Colecraft HM, Ben-Johny M, Kalocsay M, Marx SO.
Nature
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An expanded mouse testis transcriptome and mass spectrometry defines novel proteins.
Authors: Authors: Gamble J, Chick J, Seltzer K, Graber JH, Gygi S, Braun RE, Snyder EM.
Reproduction
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Expedited mapping of the ligandable proteome using fully functionalized enantiomeric probe pairs.
Authors: Authors: Wang Y, Dix MM, Bianco G, Remsberg JR, Lee HY, Kalocsay M, Gygi SP, Forli S, Vite G, Lawrence RM, Parker CG, Cravatt BF.
Nat Chem
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Thiol-based direct threat sensing by the stress-activated protein kinase Hog1.
Authors: Authors: Guerra-Moreno A, Prado MA, Ang J, Schnell HM, Micoogullari Y, Paulo JA, Finley D, Gygi SP, Hanna J.
Sci Signal
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Investigation of Proteomic and Phosphoproteomic Responses to Signaling Network Perturbations Reveals Functional Pathway Organizations in Yeast.
Authors: Authors: Li J, Paulo JA, Nusinow DP, Huttlin EL, Gygi SP.
Cell Rep
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