Steven Gygi, Ph.D.

Steven Gygi, Ph.D.

Professor of Cell Biology (HMS)

Steven Gygi, Ph.D., received his Ph.D. from the University of Utah in Pharmacology and Toxicology performing small molecule mass spectrometry.  He went on to pursue postdoctoral work with Ruedi Aebersold at the University of Washington in 1996.  A revolution in biological mass spectrometry was occurring which allowed for the measurement of protein expression levels and a new field, Proteomics, was born.  In 2000, Dr. Gygi moved to Harvard Medical School and joined the Department of Cell Biology.  Currently, he is the faculty director of two MS core facilities (Taplin Biological MS Facility, and the Thermo Fisher Center for Multiplexed Proteomics—TCMP@HMS).

Research in the Gygi lab centers around developing and applying new technologies in the field of mass spectrometry-based proteomics.  These include the systematic and proteome-wide measurements of many protein properties including their expression levels, modification states, structure, localization, function, and interactions.  For example, the Gygi lab, together with the Harper lab at HMS, is creating a genome-scale map of the protein-protein interaction landscape in cells (termed BioPlex).  In addition, sample multiplexing techniques like Tandem Mass Tags (TMT) are being improved to allow up to 16 proteomics samples to be analyzed simultaneously using high resolution mass spectrometry.

Harvard Medical School

Dept. of Cell Biology, C-523B

240 Longwood Avenue

Boston, MA 02115

Lab telephone: 617-432-3155

Lab fax: 617-432-1144

Highly specific intracellular ubiquitination of a small molecule.
Authors: Authors: Li W, Garcia-Rivera EM, Mitchell DC, Chick JM, Maetani M, Knapp JM, Matthews GM, Shirasaki R, de Matos Simoes R, Viswanathan V, Pulice JL, Rees MG, Roth JA, Gygi SP, Mitsiades CS, Kadoch C, Schreiber SL, Ostrem JML.
bioRxiv
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Large-scale characterization of drug mechanism of action using proteome-wide thermal shift assays.
Authors: Authors: Van Vranken JG, Li J, Mintseris J, Gadzuk-Shea M, Gygi SP, Schweppe DK.
bioRxiv
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Phosphate starvation signaling increases mitochondrial membrane potential through respiration-independent mechanisms.
Authors: Authors: Ouyang Y, Jeong MY, Cunningham CN, Berg JA, Toshniwal AG, Hughes CE, Seiler K, Van Vranken JG, Cluntun AA, Lam G, Winter JM, Akdogan E, Dove KK, Nowinski SM, West M, Odorizzi G, Gygi SP, Dunn CD, Winge DR, Rutter J.
Elife
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ALS-related p97 R155H mutation disrupts lysophagy in iPSC-derived motor neurons.
Authors: Authors: Klickstein JA, Johnson MA, Antonoudiou P, Maguire J, Paulo JA, Gygi SP, Weihl C, Raman M.
Stem Cell Reports
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Covalent inhibition of pro-apoptotic BAX.
Authors: Authors: McHenry MW, Shi P, Camara CM, Cohen DT, Rettenmaier TJ, Adhikary U, Gygi MA, Yang K, Gygi SP, Wales TE, Engen JR, Wells JA, Walensky LD.
Nat Chem Biol
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The Hao-Fountain syndrome protein USP7 regulates neuronal connectivity in the brain via a novel p53-independent ubiquitin signaling pathway.
Authors: Authors: Chen H, Ferguson CJ, Mitchell DC, Titus A, Paulo JA, Hwang A, Lin TH, Yano H, Gu W, Song SK, Yuede CM, Gygi SP, Bonni A, Kim AH.
bioRxiv
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Adapting an Isobaric Tag-Labeled Yeast Peptide Standard to Develop Targeted Proteomics Assays.
Authors: Authors: Dong KD, Schmid EW, Bomgarden RD, Choi JH, Gygi SP, Yu Q, Paulo JA.
J Proteome Res
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UBXN1 maintains ER proteostasis and represses UPR activation by modulating translation.
Authors: Authors: Ahlstedt BA, Ganji R, Mukkavalli S, Paulo JA, Gygi SP, Raman M.
EMBO Rep
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Publisher Correction: Structural insights into cytokine cleavage by inflammatory caspase-4.
Authors: Authors: Devant P, Dong Y, Mintseris J, Ma W, Gygi SP, Wu H, Kagan JC.
Nature
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Bidirectional substrate shuttling between the 26S proteasome and the Cdc48 ATPase promotes protein degradation.
Authors: Authors: Li H, Ji Z, Paulo JA, Gygi SP, Rapoport TA.
bioRxiv
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