Steven Gygi, Ph.D.

Steven Gygi, Ph.D.

Professor of Cell Biology (HMS)
C-523C

Steven Gygi, Ph.D., received his Ph.D. from the University of Utah in Pharmacology and Toxicology performing small molecule mass spectrometry.  He went on to pursue postdoctoral work with Ruedi Aebersold at the University of Washington in 1996.  A revolution in biological mass spectrometry was occurring which allowed for the measurement of protein expression levels and a new field, Proteomics, was born.  In 2000, Dr. Gygi moved to Harvard Medical School and joined the Department of Cell Biology.  Currently, he is the faculty director of two MS core facilities (Taplin Biological MS Facility, and the Thermo Fisher Center for Multiplexed Proteomics—TCMP@HMS).

Research in the Gygi lab centers around developing and applying new technologies in the field of mass spectrometry-based proteomics.  These include the systematic and proteome-wide measurements of many protein properties including their expression levels, modification states, structure, localization, function, and interactions.  For example, the Gygi lab, together with the Harper lab at HMS, is creating a genome-scale map of the protein-protein interaction landscape in cells (termed BioPlex).  In addition, sample multiplexing techniques like Tandem Mass Tags (TMT) are being improved to allow up to 16 proteomics samples to be analyzed simultaneously using high resolution mass spectrometry.

Harvard Medical School

Dept. of Cell Biology, C-523B

240 Longwood Avenue

Boston, MA 02115

Proteome-wide mapping of short-lived proteins in human cells.
Authors: Authors: Li J, Cai Z, Vaites LP, Shen N, Mitchell DC, Huttlin EL, Paulo JA, Harry BL, Gygi SP.
Mol Cell
View full abstract on Pubmed
Regulation of protein abundance in genetically diverse mouse populations.
Authors: Authors: Keele GR, Zhang T, Pham DT, Vincent M, Bell TA, Hock P, Shaw GD, Paulo JA, Munger SC, de Villena FP, Ferris MT, Gygi SP, Churchill GA.
Cell Genom
View full abstract on Pubmed
A composite DNA element that functions as a maintainer required for epigenetic inheritance of heterochromatin.
Authors: Authors: Wang X, Paulo JA, Li X, Zhou H, Yu J, Gygi SP, Moazed D.
Mol Cell
View full abstract on Pubmed
The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Disorder.
Authors: Authors: Nuebel E, Morgan JT, Fogarty S, Winter JM, Lettlova S, Berg JA, Chen YC, Kidwell CU, Maschek JA, Clowers KJ, Argyriou C, Chen L, Wittig I, Cox JE, Roh-Johnson M, Braverman N, Bonkowsky J, Gygi SP, Rutter J.
EMBO Rep
View full abstract on Pubmed
Filamin C Cardiomyopathy Variants Cause Protein and Lysosome Accumulation.
Authors: Authors: Agarwal R, Paulo JA, Toepfer CN, Ewoldt JK, Sundaram S, Chopra A, Zhang Q, Gorham J, DePalma SR, Chen CS, Gygi SP, Seidman CE, Seidman JG.
Circ Res
View full abstract on Pubmed
A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics.
Authors: Authors: Si L, Bai H, Rodas M, Cao W, Oh CY, Jiang A, Moller R, Hoagland D, Oishi K, Horiuchi S, Uhl S, Blanco-Melo D, Albrecht RA, Liu WC, Jordan T, Nilsson-Payant BE, Golynker I, Frere J, Logue J, Haupt R, McGrath M, Weston S, Zhang T, Plebani R, Soong M, Nurani A, Kim SM, Zhu DY, Benam KH, Goyal G, Gilpin SE, Prantil-Baun R, Gygi SP, Powers RK, Carlson KE, Frieman M, tenOever BR, Ingber DE.
Nat Biomed Eng
View full abstract on Pubmed
Mechanism of p38 MAPK-induced EGFR endocytosis and its crosstalk with ligand-induced pathways.
Authors: Authors: Perez Verdaguer M, Zhang T, Paulo JA, Gygi S, Watkins SC, Sakurai H, Sorkin A.
J Cell Biol
View full abstract on Pubmed
A Compendium of Murine (Phospho)Peptides Encompassing Different Isobaric Labeling and Data Acquisition Strategies.
Authors: Authors: Popow O, Liu X, Haigis KM, Gygi SP, Paulo JA.
J Proteome Res
View full abstract on Pubmed
Proteomic analysis identifies the E3 ubiquitin ligase Pdzrn3 as a regulatory target of Wnt5a-Ror signaling.
Authors: Authors: Konopelski Snavely SE, Susman MW, Kunz RC, Tan J, Srinivasan S, Cohen MD, Okada K, Lamb H, Choi SS, Karuna EP, Scales MK, Gygi SP, Greenberg ME, Ho HH.
Proc Natl Acad Sci U S A
View full abstract on Pubmed
Temporal proteomic changes induced by nicotine in human cells: A quantitative proteomics approach.
Authors: Authors: Navarrete-Perea J, Gygi SP, Paulo JA.
J Proteomics
View full abstract on Pubmed